我想做cURL GET请求。应使用以下URL:
https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi' -H 'Host: iant.toulouse.inra.fr' -H 'User-Agent: Mozilla/5.0 (X11; Ubuntu; Linux x86_64; rv:56.0) Gecko/20100101 Firefox/56.0' -H 'Accept: text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8' -H 'Accept-Language: de,en-US;q=0.7,en;q=0.3' --compressed -H 'Referer: https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi?__wb_cookie=&__wb_cookie_name=auth.rhime&__wb_cookie_path=/bacteria/annotation/cgi&__wb_session=WB84Qfsf&__wb_main_menu=Genome&__wb_function=$parent' -H 'Content-Type: application/x-www-form-urlencoded' -H 'Connection: keep-alive' -H 'Upgrade-Insecure-Requests: 1' -H 'Pragma: no-cache' -H 'Cache-Control: no-cache' --data '__wb_function=PortalExtractSeq&mode=run&species=rhime&fastafile=%2Fwww%2Fbacteria%2Fannotation%2F%2Fsite%2Fprj%2Frhime%2F%2Fdb%2F$ab.genomic&begin=$start&end=$end&strand=$strand
在URL的末尾,我有一些单词,我想将其设计为变量,因此根据输入,URL不同,然后我请求另一个资源。
URL的结尾$ab、$start、$end和$strand是变量,它们都是字符串。
...2Frhime%2F%2Fdb%2F$ab.genomic&begin=$start&end=$end&strand=$strand
我遇到了“urlencode”,我想把我的URL作为一个大字符串存储在一个变量中,并将其传递给URL encode,但我不知道该怎么做。
我试过这个/我正在搜索这样的东西:
#!bin/bash
[...]
cURL="https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi' -H 'Host: iant.toulouse.inra.fr' -H 'User-Agent: Mozilla/5.0 (X11; Ubuntu; Linux x86_64; rv:56.0) Gecko/20100101 Firefox/56.0' -H 'Accept: text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8' -H 'Accept-Language: de,en-US;q=0.7,en;q=0.3' --compressed -H 'Referer: https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi?__wb_cookie=&__wb_cookie_name=auth.rhime&__wb_cookie_path=/bacteria/annotation/cgi&__wb_session=WB84Qfsf&__wb_main_menu=Genome&__wb_function=$parent' -H 'Content-Type: application/x-www-form-urlencoded' -H 'Connection: keep-alive' -H 'Upgrade-Insecure-Requests: 1' -H 'Pragma: no-cache' -H 'Cache-Control: no-cache' --data '__wb_function=PortalExtractSeq&mode=run&species=rhime&fastafile=%2Fwww%2Fbacteria%2Fannotation%2F%2Fsite%2Fprj%2Frhime%2F%2Fdb%2F$ab.genomic&begin=$start&end=$end&strand=$strand"
# storing HTTP response code in variable response. Only if the
# reponse code is OK (200), we move on
response=$(curl -X HEAD -I --header 'Accept:txt/html' "https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi?__wb_cookie=&__wb_cookie_name=auth.rhime&__wb_cookie_path=/bacteria/annotation/cgi&__wb_session=WB8jqwTM&__wb_main_menu=Genome&__wb_function="$location""|head -n1|awk '{print $2}')
echo "$response"
# getting information via curl request
if [ $response = 200 ] ; then
info=$(curl -G "$ (urlencode "$cURL")")
fi
echo $info
对于我的响应代码检查,直接传递$location的方法似乎可行,但如果变量更多,我会得到一个错误(响应代码100,而代码检查得到200)
我在理解curl/urlencode时是否有一般性错误?我错过了什么?
提前感谢您的时间和努力:)
更新
#!/bin/sh
# handling command-line input
file=$1
ecf=$2
# iterating through file and pulling out
# information for the GET- and POST-request
while read -r line
do
parent=$(echo $line | awk '{print substr($1,2,3)}')
start=$(echo $line | awk '{print substr($2,2,6)}')
end=$(echo $line | awk '{print substr($3,2,6)}')
strand=$(echo $line | awk '{print substr($4,2,1)}')
locus=$(echo $line | awk '{print substr($6,2,8)}')
# depending on $parent, the right insertion for the URL is generated
if [ $parent = "SMc" ] ; then
location="Genome"
ab="SMc"
elif [ $parent = "SMa" ] ; then
location="PrintPsyma"
ab="pSymA"
else [ $parent = "SMb" ]
location="PrintPsymb"
ab="pSymB"
fi
# building variables for curl content request
options=( --compressed)
headers=(
-H 'Host: iant.toulouse.inra.fr'
-H 'User-Agent: Mozilla/5.0 (X11; Ubuntu; Linux x86_64; rv:56.0) Gecko/20100101 Firefox/56.0'
-H 'Accept: txt/html,application/xhtml+xml,application/xml;1=0.9,*/*;q=0.8'
-H 'Accept-Language: de,en-US;q=0.7,en;q=0.3'
-H 'Referer: https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi?__wb_cookie=&__wb_cookie_name=auth.rhime&__wb_cookie_path=/bacteria/annotation/cgi&__wb_session=WB84Qfsf&__wb_main_menu=Genome&__wb_function=$parent'
-H 'Content-Type: application/x-www-form-urlencoded'
-H 'Connection: keep-alive'
-H 'Upgrade-Insecure-Requests: 1'
-H 'Pragma: no-cache'
-H 'Cache-Control: no-cache'
)
url='https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi'
ab=$(urlencode "${ab}")
start=$(urlencode "${start}")
end=$(urlencode "${end}")
strand=$(urlencode "${strand}")
data="__wb_function=PortalExtractSeq&mode=run&species=rhime&fastafile=%2Fwww%2Fbacteria%2Fannotation%2F%2Fsite%2Fprj%2Frhime%2F%2Fdb%2F$ab.genomic&begin=$start&end=$end&strand=$strand"
# storing HTTP response code in variable response. Only if the
# reponse code is OK (200), we move on
response=$(curl -X HEAD -I --header 'Accept:txt/html' "https://iant.toulouse.inra.fr/bacteria/annotation/cgi/rhime.cgi?__wb_cookie=&__wb_cookie_name=auth.rhime&__wb_cookie_path=/bacteria/annotation/cgi&__wb_session=WB8jqwTM&__wb_main_menu=Genome&__wb_function="$location""|head -n1|awk '{print $2}')
echo "$response"
# getting information via curl request
if [ $response = 200 ] ; then
info=$(curl -G "${options[@]}" "${headers[@]}" --data "${data}" "${url}")
fi
echo $info
done < $file